Description
tumor susceptibility gene 101
Synonyms
VPS23
Location
Chromosome 11: 18,468,336-18,527,232 reverse strand.
VEGA68:CM000673.2
About this gene
This gene has 12 transcripts (splice variants), 2 orthologues and 1 paralogue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| TSG101-001 | OTTHUMT00000395906.1 | 1824 | 390aa | OTTHUMP00000236662 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7842 | Q99816 | |
| TSG101-002 | OTTHUMT00000395905.2 | 2101 | 365aa | OTTHUMP00000236661 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F5H442 | |
| TSG101-015 | OTTHUMT00000447174.1 | 912 | 77aa | OTTHUMP00000261868 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| TSG101-016 | OTTHUMT00000447173.1 | 441 | 63aa | OTTHUMP00000261867 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| TSG101-004 | OTTHUMT00000395910.1 | 714 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TSG101-005 | OTTHUMT00000395914.1 | 685 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TSG101-008 | OTTHUMT00000395912.1 | 581 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TSG101-009 | OTTHUMT00000395911.1 | 391 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TSG101-003 | OTTHUMT00000395913.1 | 304 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TSG101-006 | OTTHUMT00000395908.2 | 783 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TSG101-011 | OTTHUMT00000395909.1 | 593 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TSG101-007 | OTTHUMT00000395907.1 | 571 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
