Description
PPT2-EGFL8 (NMD candidate)
Location
Chromosome 6: 32,153,845-32,171,978 forward strand.
VEGA68:CM000668.2
About this gene
This gene has 7 transcripts (splice variants), 10 orthologues and 7 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| PPT2-EGFL8-002 | OTTHUMT00000412521.1 | 4181 | 301aa | OTTHUMP00000245557 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| PPT2-EGFL8-001 | OTTHUMT00000412520.1 | 2878 | 301aa | OTTHUMP00000245556 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| PPT2-EGFL8-005 | OTTHUMT00000445612.1 | 1540 | 97aa | OTTHUMP00000261065 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A2ABN6 | |
| PPT2-EGFL8-004 | OTTHUMT00000445611.1 | 1051 | 97aa | OTTHUMP00000261064 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A2ABN6 | |
| PPT2-EGFL8-003 | OTTHUMT00000412522.2 | 999 | 129aa | OTTHUMP00000245558 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H3BNV4 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PPT2-EGFL8-006 | OTTHUMT00000268918.2 | 1327 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PPT2-EGFL8-007 | OTTHUMT00000076544.3 | 944 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
