Description
amyloid beta (A4) precursor-like protein 1
Synonyms
APLP
Location
Chromosome 19: 35,867,899-35,879,791 forward strand.
VEGA68:CM000681.2
About this gene
This gene has 12 transcripts (splice variants), 4 orthologues and 2 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| APLP1-002 | OTTHUMT00000452564.1 | 2495 | 651aa | OTTHUMP00000264975 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32997 | - | |
| APLP1-001 | OTTHUMT00000452563.1 | 2266 | 611aa | OTTHUMP00000264974 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F5GZ08 | |
| APLP1-003 | OTTHUMT00000452566.2 | 2052 | 644aa | OTTHUMP00000264977 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B7Z4G8 | |
| APLP1-011 | OTTHUMT00000452568.3 | 1324 | 294aa | OTTHUMP00000267759 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EQJ4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| APLP1-009 | OTTHUMT00000452571.2 | 1179 | 289aa | OTTHUMP00000272495 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | S4R3U6 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| APLP1-005 | OTTHUMT00000452569.4 | 664 | 221aa | OTTHUMP00000267760 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| APLP1-008 | OTTHUMT00000452567.3 | 586 | 173aa | OTTHUMP00000267758 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7ELK0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| APLP1-010 | OTTHUMT00000452572.1 | 2627 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| APLP1-004 | OTTHUMT00000452565.1 | 2295 | 118aa | OTTHUMP00000264976 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| APLP1-007 | OTTHUMT00000452570.1 | 547 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| APLP1-012 | OTTHUMT00000458120.1 | 463 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| APLP1-006 | OTTHUMT00000452573.1 | 310 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
