This is an archived version of Vega. Click here for more information.

Human

Loading…

Help & Documentation

Summary
Sequence
Protein Information
- Protein summary
- Domains & features
External References
- General identifiers
Supporting evidence
Other genome browsers
- Ensembl

Configure this page

Share this page

Bookmark this page

.

Transcript: TFE3-001 OTTHUMT00000058872.3

.

Description

transcription factor binding to IGHM enhancer 3

Location

Chromosome X: 49,028,731-49,043,486 reverse strand.

About this transcript

This transcript has 10 exons and is annotated with 21 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000022690 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
TFE3-001	OTTHUMT00000058872.3	3415	575aa	OTTHUMP00000024272	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS14315	A0A024QZ23
TFE3-005	OTTHUMT00000080954.5	3101	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
TFE3-004	OTTHUMT00000080953.4	3279	109aa	OTTHUMP00000274307	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
TFE3-006	OTTHUMT00000080955.2	1058	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
TFE3-002	OTTHUMT00000058873.1	439	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
TFE3-003	OTTHUMT00000058874.2	758	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

.

Protein summary

.

Protein domains for OTTHUMP00000024272.1

.

Transcript-based displays