Description
trinucleotide repeat containing 6A
Location
Chromosome 16: 24,729,713-24,826,227 forward strand.
About this transcript
This transcript has 25 exons and is annotated with 29 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000096999 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| TNRC6A-001 | OTTHUMT00000214081.1 | 8438 | 1962aa | OTTHUMP00000122485 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS10624 | Q8NDV7 | |
| TNRC6A-003 | OTTHUMT00000313982.2 | 8303 | 1913aa | OTTHUMP00000195164 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS81959 | - | |
| TNRC6A-004 | OTTHUMT00000313983.3 | 3700 | 906aa | OTTHUMP00000195165 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7C269 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| TNRC6A-015 | OTTHUMT00000435273.2 | 609 | 203aa | OTTHUMP00000255807 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BTQ1 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| TNRC6A-011 | OTTHUMT00000435252.1 | 587 | 160aa | OTTHUMP00000255800 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BRT3 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| TNRC6A-008 | OTTHUMT00000435249.1 | 2398 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| TNRC6A-009 | OTTHUMT00000435250.1 | 1381 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| TNRC6A-002 | OTTHUMT00000214082.3 | 7956 | 40aa | OTTHUMP00000258788 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| TNRC6A-013 | OTTHUMT00000435275.2 | 610 | 96aa | OTTHUMP00000258789 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| TNRC6A-020 | OTTHUMT00000489409.1 | 454 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TNRC6A-019 | OTTHUMT00000435458.1 | 277 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TNRC6A-005 | OTTHUMT00000313984.1 | 2740 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TNRC6A-006 | OTTHUMT00000313985.1 | 2550 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TNRC6A-007 | OTTHUMT00000313986.1 | 1853 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TNRC6A-010 | OTTHUMT00000435251.1 | 943 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TNRC6A-012 | OTTHUMT00000435276.1 | 552 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TNRC6A-017 | OTTHUMT00000435301.1 | 543 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TNRC6A-018 | OTTHUMT00000435300.1 | 523 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TNRC6A-016 | OTTHUMT00000435302.1 | 298 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TNRC6A-014 | OTTHUMT00000435274.1 | 276 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
