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Sequence
Protein Information
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Transcript: HMGB1-012 OTTHUMT00000303998.2

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Description

high mobility group box 1

Location

Chromosome 13: 30,458,747-30,617,597 reverse strand.

About this transcript

This transcript has 5 exons and is annotated with 22 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000016670 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
HMGB1-004	OTTHUMT00000044359.3	5485	215aa	OTTHUMP00000018199	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9335	P09429
HMGB1-012	OTTHUMT00000303998.2	4199	215aa	OTTHUMP00000200117	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9335	P09429
HMGB1-001	OTTHUMT00000044356.3	2319	215aa	OTTHUMP00000018196	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9335	P09429
HMGB1-011	OTTHUMT00000303982.1	1282	215aa	OTTHUMP00000190860	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9335	P09429
HMGB1-009	OTTHUMT00000303980.1	1727	158aa	OTTHUMP00000190859	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q5T7C4
HMGB1-003	OTTHUMT00000044358.1	821	158aa	OTTHUMP00000018198	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q5T7C4
HMGB1-010	OTTHUMT00000303981.1	2197	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
HMGB1-007	OTTHUMT00000044362.1	503	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
HMGB1-008	OTTHUMT00000044363.1	425	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

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Protein summary

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Protein domains for OTTHUMP00000200117.1

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Transcript-based displays