Description
prominin 1
Location
Chromosome 4: 15,968,230-16,083,732 reverse strand.
About this transcript
This transcript has 27 exons and is annotated with 13 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000160180 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| PROM1-001 | OTTHUMT00000359592.2 | 4349 | 856aa | OTTHUMP00000217744 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS54746 | A0A0A0N0M1 | |
| PROM1-003 | OTTHUMT00000359594.1 | 4014 | 856aa | OTTHUMP00000217745 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS54746 | A0A0A0N0M1 | |
| PROM1-004 | OTTHUMT00000359595.2 | 4006 | 865aa | OTTHUMP00000217746 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS47029 | O43490 | |
| PROM1-018 | OTTHUMT00000359701.1 | 581 | 93aa | OTTHUMP00000217797 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0Y9Q5 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PROM1-011 | OTTHUMT00000359694.3 | 568 | 14aa | OTTHUMP00000217795 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PROM1-009 | OTTHUMT00000359692.3 | 567 | 40aa | OTTHUMP00000217793 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PROM1-010 | OTTHUMT00000359693.3 | 551 | 57aa | OTTHUMP00000217794 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RIF3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PROM1-006 | OTTHUMT00000359597.1 | 1100 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| PROM1-005 | OTTHUMT00000359596.1 | 1595 | 54aa | OTTHUMP00000217747 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PROM1-019 | OTTHUMT00000359702.1 | 622 | 65aa | OTTHUMP00000217798 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H0Y9D4 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PROM1-007 | OTTHUMT00000359690.1 | 760 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PROM1-008 | OTTHUMT00000359691.1 | 568 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PROM1-014 | OTTHUMT00000359697.1 | 565 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PROM1-012 | OTTHUMT00000359695.2 | 540 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PROM1-015 | OTTHUMT00000359698.2 | 530 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PROM1-013 | OTTHUMT00000359696.1 | 507 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PROM1-017 | OTTHUMT00000359700.1 | 291 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PROM1-002 | OTTHUMT00000359593.1 | 2042 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
