Description
poly(A) binding protein, cytoplasmic 1
Location
Chromosome 8: 100,702,916-100,722,712 reverse strand.
About this transcript
This transcript has 15 exons and is annotated with 36 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000164779 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| PABPC1-001 | OTTHUMT00000380217.1 | 3485 | 636aa | OTTHUMP00000227462 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS6289 | A0A024R9C1 | |
| PABPC1-002 | OTTHUMT00000380218.1 | 2401 | 591aa | OTTHUMP00000227463 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EQV3 | |
| PABPC1-003 | OTTHUMT00000380219.1 | 2331 | 604aa | OTTHUMP00000227464 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7ERJ7 | |
| PABPC1-006 | OTTHUMT00000380216.1 | 971 | 169aa | OTTHUMP00000227461 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YAS6 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PABPC1-012 | OTTHUMT00000380228.1 | 851 | 284aa | OTTHUMP00000227471 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YAR2 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| PABPC1-008 | OTTHUMT00000380233.2 | 754 | 118aa | OTTHUMP00000227475 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E5RH24 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PABPC1-005 | OTTHUMT00000380222.1 | 736 | 183aa | OTTHUMP00000227467 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YB75 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PABPC1-020 | OTTHUMT00000380231.2 | 631 | 108aa | OTTHUMP00000227473 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E5RGH3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PABPC1-015 | OTTHUMT00000380232.1 | 628 | 129aa | OTTHUMP00000227474 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E5RJB9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PABPC1-021 | OTTHUMT00000380214.1 | 608 | 42aa | OTTHUMP00000227460 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YC10 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PABPC1-017 | OTTHUMT00000380234.2 | 593 | 75aa | OTTHUMP00000227476 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E5RHG7 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PABPC1-007 | OTTHUMT00000380224.1 | 560 | 187aa | OTTHUMP00000227468 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| PABPC1-009 | OTTHUMT00000380230.2 | 522 | 174aa | OTTHUMP00000227472 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YBN4 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| PABPC1-018 | OTTHUMT00000380236.3 | 493 | 43aa | OTTHUMP00000227478 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E5RGC4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PABPC1-016 | OTTHUMT00000380235.3 | 492 | 61aa | OTTHUMP00000227477 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E5RFD8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PABPC1-025 | OTTHUMT00000380221.1 | 487 | 136aa | OTTHUMP00000227466 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YAS7 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PABPC1-019 | OTTHUMT00000380237.3 | 453 | 38aa | OTTHUMP00000227479 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E5RJM8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PABPC1-004 | OTTHUMT00000380215.1 | 2755 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| PABPC1-014 | OTTHUMT00000380220.1 | 818 | 165aa | OTTHUMP00000227465 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H0YB86 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PABPC1-024 | OTTHUMT00000380227.1 | 667 | 131aa | OTTHUMP00000227470 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H0YAP2 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PABPC1-013 | OTTHUMT00000380225.1 | 771 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PABPC1-010 | OTTHUMT00000380229.1 | 885 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PABPC1-022 | OTTHUMT00000380226.1 | 694 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PABPC1-023 | OTTHUMT00000380223.1 | 676 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
