Description
collagen, type XIII, alpha 1
Location
Chromosome 10: 69,802,424-69,958,701 forward strand.
About this transcript
This transcript has 38 exons and is annotated with 26 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000018394 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| COL13A1-001 | OTTHUMT00000048468.1 | 3093 | 717aa | OTTHUMP00000019731 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44419 | Q5TAT6 | |
| COL13A1-002 | OTTHUMT00000048469.2 | 3027 | 695aa | OTTHUMP00000019732 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44424 | - | |
| COL13A1-011 | OTTHUMT00000380458.1 | 2276 | 645aa | OTTHUMP00000227634 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44427 | - | |
| COL13A1-014 | OTTHUMT00000380460.1 | 2061 | 686aa | OTTHUMP00000227636 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44425 | - | |
| COL13A1-013 | OTTHUMT00000380459.2 | 2007 | 668aa | OTTHUMP00000227635 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44423 | - | |
| COL13A1-015 | OTTHUMT00000380461.1 | 1833 | 610aa | OTTHUMP00000227637 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44428 | - | |
| COL13A1-004 | OTTHUMT00000048471.1 | 2991 | 683aa | OTTHUMP00000019733 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| COL13A1-006 | OTTHUMT00000048473.1 | 1057 | 247aa | OTTHUMP00000019734 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| COL13A1-008 | OTTHUMT00000048475.2 | 749 | 174aa | OTTHUMP00000194896 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| COL13A1-003 | OTTHUMT00000048470.2 | 2934 | 582aa | OTTHUMP00000227633 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| COL13A1-007 | OTTHUMT00000048478.2 | 360 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| COL13A1-012 | OTTHUMT00000380462.1 | 290 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| COL13A1-009 | OTTHUMT00000048476.2 | 2586 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
