Description
phosphofurin acidic cluster sorting protein 1
Location
Chromosome 11: 66,070,454-66,244,747 forward strand.
About this transcript
This transcript has 24 exons and is annotated with 12 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000166889 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| PACS1-001 | OTTHUMT00000391690.2 | 4392 | 963aa | OTTHUMP00000234308 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS8129 | Q6VY07 | |
| PACS1-004 | OTTHUMT00000391696.1 | 1688 | 499aa | OTTHUMP00000234312 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| PACS1-010 | OTTHUMT00000391698.2 | 846 | 79aa | OTTHUMP00000234313 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PACS1-015 | OTTHUMT00000391703.1 | 679 | 107aa | OTTHUMP00000234316 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PACS1-013 | OTTHUMT00000391701.1 | 628 | 91aa | OTTHUMP00000234314 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| PACS1-014 | OTTHUMT00000391702.2 | 617 | 76aa | OTTHUMP00000234315 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PACS1-017 | OTTHUMT00000391788.2 | 578 | 106aa | OTTHUMP00000234370 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PACS1-016 | OTTHUMT00000391691.2 | 548 | 166aa | OTTHUMP00000234309 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PACS1-002 | OTTHUMT00000391688.1 | 2621 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| PACS1-005 | OTTHUMT00000391697.1 | 1634 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| PACS1-007 | OTTHUMT00000391692.1 | 547 | 118aa | OTTHUMP00000234310 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PACS1-006 | OTTHUMT00000391693.1 | 540 | 89aa | OTTHUMP00000234311 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PACS1-003 | OTTHUMT00000391689.1 | 3024 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PACS1-009 | OTTHUMT00000391695.1 | 612 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PACS1-012 | OTTHUMT00000391700.1 | 589 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PACS1-008 | OTTHUMT00000391694.1 | 541 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PACS1-011 | OTTHUMT00000391699.1 | 448 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
