Description
nuclear RNA export factor 1
Location
Chromosome 11: 62,792,123-62,805,470 reverse strand.
About this transcript
This transcript has 20 exons and is annotated with 14 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000167612 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| NXF1-006 | OTTHUMT00000395364.3 | 4128 | 356aa | OTTHUMP00000246987 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44629 | - | |
| NXF1-001 | OTTHUMT00000395365.2 | 2795 | 619aa | OTTHUMP00000236352 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS8037 | Q9UBU9 | |
| NXF1-003 | OTTHUMT00000395367.2 | 1922 | 603aa | OTTHUMP00000236353 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PIN3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| NXF1-004 | OTTHUMT00000395370.3 | 1023 | 219aa | OTTHUMP00000274389 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B4E227 | |
| NXF1-013 | OTTHUMT00000395552.1 | 619 | 124aa | OTTHUMP00000236430 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YDU0 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| NXF1-012 | OTTHUMT00000395372.2 | 589 | 115aa | OTTHUMP00000236354 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PLA7 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| NXF1-002 | OTTHUMT00000395374.2 | 548 | 63aa | OTTHUMP00000236356 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PMV7 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| NXF1-005 | OTTHUMT00000395371.1 | 921 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| NXF1-010 | OTTHUMT00000395373.1 | 572 | 76aa | OTTHUMP00000236355 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| NXF1-014 | OTTHUMT00000395553.1 | 922 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| NXF1-009 | OTTHUMT00000395368.2 | 590 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| NXF1-011 | OTTHUMT00000395369.1 | 569 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| NXF1-007 | OTTHUMT00000395366.1 | 936 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| NXF1-015 | OTTHUMT00000395555.1 | 579 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| NXF1-008 | OTTHUMT00000395375.1 | 572 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| NXF1-017 | OTTHUMT00000395554.1 | 529 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| NXF1-016 | OTTHUMT00000395556.1 | 390 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
