This is an archived version of Vega. Click here for more information.

Human

Loading…

Help & Documentation

Summary
Sequence
Protein Information
- Protein summary
- Domains & features
External References
- General identifiers
Supporting evidence
Other genome browsers
- Ensembl

Configure this page

Share this page

Bookmark this page

.

Transcript: NPTX1-001 OTTHUMT00000438051.1

.

Description

neuronal pentraxin I

Location

Chromosome 17: 80,467,148-80,476,604 reverse strand.

About this transcript

This transcript has 5 exons and is annotated with 20 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000177607 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
NPTX1-001	OTTHUMT00000438051.1	5122	432aa	OTTHUMP00000257225	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS32762	Q15818
NPTX1-003	OTTHUMT00000438049.1	6177	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
NPTX1-004	OTTHUMT00000438053.1	472	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
NPTX1-002	OTTHUMT00000438050.1	3957	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
NPTX1-005	OTTHUMT00000438052.1	556	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

.

Protein summary

.

Protein domains for OTTHUMP00000257225.1

.

Transcript-based displays