Description
Rho guanine nucleotide exchange factor (GEF) 1
Location
Chromosome 19: 41,884,370-41,907,454 forward strand.
About this transcript
This transcript has 27 exons and is annotated with 21 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000182679 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| ARHGEF1-005 | OTTHUMT00000463360.1 | 3243 | 912aa | OTTHUMP00000270011 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12591 | A0A024R0R1 | |
| ARHGEF1-006 | OTTHUMT00000463366.1 | 3171 | 927aa | OTTHUMP00000270014 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12590 | - | |
| ARHGEF1-001 | OTTHUMT00000463063.1 | 3091 | 879aa | OTTHUMP00000269848 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12592 | - | |
| ARHGEF1-010 | OTTHUMT00000463362.1 | 3393 | 968aa | OTTHUMP00000270012 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | M0QZR4 | |
| ARHGEF1-007 | OTTHUMT00000463365.1 | 2986 | 948aa | OTTHUMP00000270013 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| ARHGEF1-009 | OTTHUMT00000463371.1 | 2636 | 702aa | OTTHUMP00000270017 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | M0QYC1 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| ARHGEF1-017 | OTTHUMT00000463373.2 | 919 | 307aa | OTTHUMP00000270018 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | M0QYS3 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| ARHGEF1-022 | OTTHUMT00000463375.2 | 872 | 291aa | OTTHUMP00000270019 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | M0R2C7 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| ARHGEF1-015 | OTTHUMT00000463369.2 | 826 | 275aa | OTTHUMP00000270016 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | M0QZH8 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| ARHGEF1-024 | OTTHUMT00000463380.1 | 769 | 128aa | OTTHUMP00000270021 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| ARHGEF1-003 | OTTHUMT00000463062.1 | 5027 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| ARHGEF1-004 | OTTHUMT00000463363.1 | 3122 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| ARHGEF1-008 | OTTHUMT00000463367.1 | 3043 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| ARHGEF1-014 | OTTHUMT00000463368.1 | 588 | 88aa | OTTHUMP00000270015 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | M0R3H5 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| ARHGEF1-019 | OTTHUMT00000463376.1 | 428 | 68aa | OTTHUMP00000270020 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| ARHGEF1-013 | OTTHUMT00000463364.1 | 570 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ARHGEF1-026 | OTTHUMT00000463381.1 | 325 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ARHGEF1-002 | OTTHUMT00000463061.1 | 3439 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ARHGEF1-011 | OTTHUMT00000463372.1 | 2973 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ARHGEF1-012 | OTTHUMT00000463361.1 | 2272 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ARHGEF1-018 | OTTHUMT00000463374.1 | 834 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ARHGEF1-016 | OTTHUMT00000463370.3 | 737 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ARHGEF1-025 | OTTHUMT00000463382.1 | 663 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ARHGEF1-023 | OTTHUMT00000463379.1 | 576 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ARHGEF1-021 | OTTHUMT00000463378.1 | 425 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ARHGEF1-020 | OTTHUMT00000463377.1 | 359 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
