Transcript: SRM-001 OTTHUMT00000006056.1

Description

spermidine synthase

Location

About this transcript

This transcript has 8 exons and is annotated with 12 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SRM-001	OTTHUMT00000006056.1	1266	302aa	OTTHUMP00000002170	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS125	P19623
SRM-007	OTTHUMT00000006062.3	611	119aa	OTTHUMP00000262717	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SRM-004	OTTHUMT00000006059.2	461	83aa	OTTHUMP00000262714	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SRM-006	OTTHUMT00000006061.2	402	134aa	OTTHUMP00000262715	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
SRM-005	OTTHUMT00000006060.2	731	93aa	OTTHUMP00000262716	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
SRM-002	OTTHUMT00000006057.1	545	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 8 Transcript length: 1,266 bps Translation length: 302 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS125

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 27/02/2014 (Created on 21/10/2003)

Alternative symbols

RP4-635E18.4-001

Other assemblies

This transcript maps to 11,054,589-11,060,024 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000376957

Curation Method

Manual annotation from Havana