Description
pumilio homolog 1 (Drosophila)
Location
Chromosome 1: 30,931,506-31,065,698 reverse strand.
About this transcript
This transcript has 22 exons and is annotated with 43 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000003795 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| PUM1-001 | OTTHUMT00000010671.1 | 5360 | 1186aa | OTTHUMP00000003892 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS338 | Q14671 | |
| PUM1-010 | OTTHUMT00000393198.1 | 4043 | 1188aa | OTTHUMP00000235191 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44099 | - | |
| PUM1-004 | OTTHUMT00000010674.1 | 5375 | 1189aa | OTTHUMP00000003895 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q5T1Z4 | |
| PUM1-014 | OTTHUMT00000393196.1 | 4631 | 944aa | OTTHUMP00000235189 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PR38 | |
| PUM1-012 | OTTHUMT00000393197.1 | 4528 | 1125aa | OTTHUMP00000235190 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YEH2 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PUM1-002 | OTTHUMT00000010672.2 | 4242 | 1224aa | OTTHUMP00000003893 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q5T1Z8 | |
| PUM1-013 | OTTHUMT00000393199.1 | 3936 | 1162aa | OTTHUMP00000235193 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| PUM1-011 | OTTHUMT00000393200.1 | 3515 | 1127aa | OTTHUMP00000235194 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| PUM1-005 | OTTHUMT00000010675.4 | 3068 | 900aa | OTTHUMP00000235192 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YDK8 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PUM1-018 | OTTHUMT00000393205.2 | 793 | 265aa | OTTHUMP00000235199 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| PUM1-024 | OTTHUMT00000393202.2 | 683 | 227aa | OTTHUMP00000235196 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YC97 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| PUM1-022 | OTTHUMT00000393203.2 | 650 | 217aa | OTTHUMP00000235197 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YDC5 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| PUM1-020 | OTTHUMT00000393210.2 | 549 | 96aa | OTTHUMP00000235203 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PUM1-003 | OTTHUMT00000010673.2 | 3233 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| PUM1-015 | OTTHUMT00000393208.1 | 1103 | 94aa | OTTHUMP00000235201 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| PUM1-009 | OTTHUMT00000010679.2 | 906 | 124aa | OTTHUMP00000235202 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| PUM1-021 | OTTHUMT00000393204.1 | 652 | 90aa | OTTHUMP00000235198 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PUM1-016 | OTTHUMT00000393207.1 | 586 | 94aa | OTTHUMP00000235200 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| PUM1-023 | OTTHUMT00000393201.1 | 582 | 76aa | OTTHUMP00000235195 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H0YDQ6 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PUM1-007 | OTTHUMT00000010677.1 | 707 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PUM1-019 | OTTHUMT00000393206.1 | 579 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PUM1-008 | OTTHUMT00000010678.1 | 812 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PUM1-017 | OTTHUMT00000393209.1 | 561 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PUM1-006 | OTTHUMT00000010676.1 | 422 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
