Transcript: TULP4-001 OTTHUMT00000042869.2

Description

tubby like protein 4

Location

About this transcript

This transcript has 14 exons and is annotated with 29 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
TULP4-001	OTTHUMT00000042869.2	11295	1543aa	OTTHUMP00000017502	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS34561	Q9NRJ4
TULP4-002	OTTHUMT00000042870.2	5170	678aa	OTTHUMP00000017503	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS34562	-
TULP4-004	OTTHUMT00000475174.1	804	216aa	OTTHUMP00000275277	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A087WYH3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
TULP4-006	OTTHUMT00000475171.1	680	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
TULP4-007	OTTHUMT00000475172.1	433	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
TULP4-005	OTTHUMT00000042868.1	424	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
TULP4-003	OTTHUMT00000475173.1	2307	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 14 Transcript length: 11,295 bps Translation length: 1,543 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS34561

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 12/07/2002)

Alternative symbols

RP3-442A17.1-001

Remarks

tubby super-family protein (TUSP, KIAA1397)

Other assemblies

This transcript maps to 158,312,488-158,511,828 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000367097

Curation Method

Manual annotation from Havana