Description
MMS19 nucleotide excision repair homolog (S. cerevisiae)
Location
Chromosome 10: 97,458,324-97,498,720 reverse strand.
About this transcript
This transcript has 31 exons and is annotated with 14 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000018857 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| MMS19-005 | OTTHUMT00000049706.2 | 3797 | 1030aa | OTTHUMP00000020210 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7464 | Q96T76 | |
| MMS19-006 | OTTHUMT00000049707.2 | 3532 | 1030aa | OTTHUMP00000020211 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7464 | Q96T76 | |
| MMS19-018 | OTTHUMT00000049719.2 | 3165 | 932aa | OTTHUMP00000020213 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS81493 | - | |
| MMS19-020 | OTTHUMT00000049721.2 | 2164 | 598aa | OTTHUMP00000198345 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| MMS19-012 | OTTHUMT00000049713.4 | 933 | 302aa | OTTHUMP00000020212 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| MMS19-010 | OTTHUMT00000049711.3 | 877 | 277aa | OTTHUMP00000198341 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| MMS19-017 | OTTHUMT00000049718.2 | 640 | 90aa | OTTHUMP00000198344 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| MMS19-019 | OTTHUMT00000049720.1 | 2707 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| MMS19-007 | OTTHUMT00000049708.2 | 3401 | 40aa | OTTHUMP00000198339 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| MMS19-009 | OTTHUMT00000049710.2 | 916 | 40aa | OTTHUMP00000198340 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| MMS19-014 | OTTHUMT00000049715.2 | 882 | 149aa | OTTHUMP00000198343 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| MMS19-013 | OTTHUMT00000049714.2 | 776 | 98aa | OTTHUMP00000198342 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| MMS19-004 | OTTHUMT00000049705.2 | 609 | 173aa | OTTHUMP00000198338 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| MMS19-008 | OTTHUMT00000049709.2 | 884 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| MMS19-021 | OTTHUMT00000049722.1 | 1879 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| MMS19-002 | OTTHUMT00000049703.1 | 1513 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| MMS19-003 | OTTHUMT00000049704.2 | 986 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| MMS19-015 | OTTHUMT00000049716.1 | 835 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| MMS19-016 | OTTHUMT00000049717.1 | 677 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
