Transcript: SIGMAR1-001 OTTHUMT00000052204.1

Description

sigma non-opioid intracellular receptor 1

Location

About this transcript

This transcript has 4 exons and is annotated with 5 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
SIGMAR1-001	OTTHUMT00000052204.1	1656	223aa	OTTHUMP00000021286	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6562	Q99720
SIGMAR1-008	OTTHUMT00000251704.1	840	192aa	OTTHUMP00000159911	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6563	A2A3U5
SIGMAR1-002	OTTHUMT00000052205.1	1743	134aa	OTTHUMP00000021287	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
SIGMAR1-003	OTTHUMT00000052206.3	1582	106aa	OTTHUMP00000021288	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
SIGMAR1-006	OTTHUMT00000052209.1	939	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SIGMAR1-007	OTTHUMT00000052210.1	610	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SIGMAR1-005	OTTHUMT00000052208.1	485	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 4 Transcript length: 1,656 bps Translation length: 223 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS6562

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 11/12/2003)

Alternative symbols

RP11-443P11.3-001

Remarks

sigma receptor (SR31747 binding protein 1)

Other assemblies

This transcript maps to 34,634,722-34,637,771 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000277010

Curation Method

Manual annotation from Havana