Transcript: GALNT12-001 OTTHUMT00000053382.1

Description

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)

Location

About this transcript

This transcript has 10 exons and is annotated with 14 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
GALNT12-001	OTTHUMT00000053382.1	2735	581aa	OTTHUMP00000021781	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6737	Q8IXK2
GALNT12-003	OTTHUMT00000476308.1	550	31aa	OTTHUMP00000275535	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
GALNT12-002	OTTHUMT00000053383.1	772	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
GALNT12-004	OTTHUMT00000476309.1	633	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 10 Transcript length: 2,735 bps Translation length: 581 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS6737

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 11/12/2003)

Alternative symbols

RP11-92C4.5-001

Remarks

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)

Other assemblies

This transcript maps to 98,807,699-98,850,081 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000375011

Curation Method

Manual annotation from Havana