Transcript: SETX-001 OTTHUMT00000054774.3

Description

senataxin

Location

About this transcript

This transcript has 26 exons and is annotated with 20 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SETX-001	OTTHUMT00000054774.3	11100	2677aa	OTTHUMP00000022428	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6947	Q7Z333
SETX-003	OTTHUMT00000054775.2	5730	948aa	OTTHUMP00000022429	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	X6RI79	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SETX-002	OTTHUMT00000254585.2	2606	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
SETX-004	OTTHUMT00000054776.2	4067	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SETX-006	OTTHUMT00000054778.1	719	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SETX-005	OTTHUMT00000054777.2	631	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 26 Transcript length: 11,100 bps Translation length: 2,677 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS6947

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 14/04/2003)

Alternative symbols

RP11-479K20.3-001

Other assemblies

This transcript maps to 132,261,356-132,354,985 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000224140

Curation Method

Manual annotation from Havana