Transcript: SPTLC1-002 OTTHUMT00000055554.1

Description

serine palmitoyltransferase, long chain base subunit 1

Location

Chromosome 9: 92,079,061-92,115,383 reverse strand.

About this transcript

This transcript has 6 exons and is annotated with 6 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000021047 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
SPTLC1-001	OTTHUMT00000055553.1	1894	473aa	OTTHUMP00000022810	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6692	O15269
SPTLC1-002	OTTHUMT00000055554.1	946	143aa	OTTHUMP00000022811	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6693	-
SPTLC1-003	OTTHUMT00000055555.1	1566	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
SPTLC1-006	OTTHUMT00000055558.1	837	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SPTLC1-005	OTTHUMT00000055557.1	808	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SPTLC1-004	OTTHUMT00000055556.1	686	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SPTLC1-008	OTTHUMT00000055560.1	490	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SPTLC1-007	OTTHUMT00000055559.1	359	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 6 Transcript length: 946 bps Translation length: 143 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS6693

Class

protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 11/12/2003)

Alternative symbols

RP11-118F2.1-002

Remarks

serine palmitoyltransferase, long chain base subunit 1

Other assemblies

This transcript maps to 92,079,061-92,115,383 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000337841

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: SPTLC1-002 OTTHUMT00000055554.1

Summary

Transcript-based displays