Description
SPEG complex locus
Location
Chromosome 2: 219,460,766-219,466,841 forward strand.
About this transcript
This transcript has 5 exons and is annotated with 9 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000058925 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SPEG-004 | OTTHUMT00000130252.2 | 10782 | 3267aa | OTTHUMP00000064868 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS42824 | Q15772 | |
| SPEG-006 | OTTHUMT00000130254.2 | 1457 | 113aa | OTTHUMP00000196351 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS54432 | Q15772 | |
| SPEG-007 | OTTHUMT00000130255.2 | 1274 | 113aa | OTTHUMP00000196352 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS54432 | Q15772 | |
| SPEG-010 | OTTHUMT00000130258.2 | 1086 | 113aa | OTTHUMP00000196353 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS54432 | Q15772 | |
| SPEG-014 | OTTHUMT00000316411.1 | 3379 | 858aa | OTTHUMP00000196350 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B9ZVR7 | |
| SPEG-021 | OTTHUMT00000130261.1 | 1085 | 343aa | OTTHUMP00000196378 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7BZM6 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SPEG-009 | OTTHUMT00000130257.4 | 926 | 299aa | OTTHUMP00000064869 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SPEG-013 | OTTHUMT00000316410.3 | 605 | 187aa | OTTHUMP00000196349 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SPEG-023 | OTTHUMT00000322785.2 | 551 | 184aa | OTTHUMP00000200067 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| SPEG-003 | OTTHUMT00000130251.2 | 9281 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SPEG-011 | OTTHUMT00000130259.5 | 583 | 84aa | OTTHUMP00000199566 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SPEG-015 | OTTHUMT00000316412.3 | 579 | 53aa | OTTHUMP00000199567 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SPEG-016 | OTTHUMT00000316413.2 | 546 | 53aa | OTTHUMP00000199568 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SPEG-025 | OTTHUMT00000330740.1 | 420 | 43aa | OTTHUMP00000203701 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SPEG-024 | OTTHUMT00000330739.2 | 9854 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SPEG-001 | OTTHUMT00000130249.1 | 3874 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SPEG-005 | OTTHUMT00000130253.1 | 3487 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SPEG-017 | OTTHUMT00000316462.1 | 590 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SPEG-020 | OTTHUMT00000316465.1 | 567 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SPEG-019 | OTTHUMT00000316464.1 | 566 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SPEG-018 | OTTHUMT00000316463.1 | 554 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SPEG-002 | OTTHUMT00000130250.1 | 5132 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SPEG-008 | OTTHUMT00000130256.1 | 2159 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SPEG-012 | OTTHUMT00000130260.1 | 1888 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SPEG-022 | OTTHUMT00000130262.1 | 408 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
