Transcript: AGR2-001 OTTHUMT00000207594.2

Description

anterior gradient homolog 2 (Xenopus laevis)

Location

About this transcript

This transcript has 8 exons and is annotated with 6 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
AGR2-001	OTTHUMT00000207594.2	1778	175aa	OTTHUMP00000116014	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5364	Q4JM46
AGR2-005	OTTHUMT00000326384.1	782	188aa	OTTHUMP00000201755	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
AGR2-006	OTTHUMT00000326385.1	671	119aa	OTTHUMP00000201756	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
AGR2-007	OTTHUMT00000326386.2	670	131aa	OTTHUMP00000201757	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
AGR2-003	OTTHUMT00000326382.1	117	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
AGR2-002	OTTHUMT00000326381.1	585	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
AGR2-004	OTTHUMT00000326383.1	572	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 8 Transcript length: 1,778 bps Translation length: 175 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS5364

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 19/09/2005)

Alternative symbols

AC073333.6-001

Other assemblies

This transcript maps to 16,791,811-16,805,080 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000419304

Curation Method

Manual annotation from Havana