Transcript: BRE-001 OTTHUMT00000215111.1

Description

brain and reproductive organ-expressed (TNFRSF1A modulator)

Location

Chromosome 2: 27,890,729-28,338,901 forward strand.

About this transcript

This transcript has 13 exons and is annotated with 3 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000097831 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
BRE-001	OTTHUMT00000215111.1	1852	415aa	OTTHUMP00000123504	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS1764	Q9NXR7
BRE-002	OTTHUMT00000215112.1	1752	376aa	OTTHUMP00000123505	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS1765	-
BRE-005	OTTHUMT00000215115.1	1686	376aa	OTTHUMP00000123508	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS1765	-
BRE-004	OTTHUMT00000215114.1	1681	383aa	OTTHUMP00000123507	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS1763	Q9NXR7
BRE-003	OTTHUMT00000215113.1	1657	383aa	OTTHUMP00000123506	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS1763	Q9NXR7
BRE-006	OTTHUMT00000324554.2	874	153aa	OTTHUMP00000200845	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9J2G0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
BRE-009	OTTHUMT00000324557.2	865	284aa	OTTHUMP00000200846	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F8W733	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
BRE-011	OTTHUMT00000470095.2	500	166aa	OTTHUMP00000273225	Non stop decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
BRE-010	OTTHUMT00000470094.1	494	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
BRE-008	OTTHUMT00000324556.1	738	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
BRE-007	OTTHUMT00000324555.1	616	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 13 Transcript length: 1,852 bps Translation length: 415 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS1764

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 27/02/2014 (Created on 26/09/2005)

Alternative symbols

AC104695.1-001

Other assemblies

This transcript maps to 27,890,729-28,338,901 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000344773

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: BRE-001 OTTHUMT00000215111.1

Summary

Transcript-based displays