Transcript: SLC30A9-001 OTTHUMT00000216842.3

Description

solute carrier family 30 (zinc transporter), member 9

Location

About this transcript

This transcript has 18 exons and is annotated with 16 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
SLC30A9-001	OTTHUMT00000216842.3	6218	568aa	OTTHUMP00000125233	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS3465	A0A0S2Z514
SLC30A9-003	OTTHUMT00000360968.1	3127	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
SLC30A9-002	OTTHUMT00000360967.1	2217	119aa	OTTHUMP00000218401	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
SLC30A9-005	OTTHUMT00000360970.2	1078	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SLC30A9-004	OTTHUMT00000360969.1	819	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SLC30A9-006	OTTHUMT00000360971.1	809	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 18 Transcript length: 6,218 bps Translation length: 568 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS3465

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 27/09/2005)

Alternative symbols

AC113151.1-001

Other assemblies

This transcript maps to 41,990,472-42,090,457 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000264451

Curation Method

Manual annotation from Havana