Transcript: SPOCK1-001 OTTHUMT00000251222.1

Description

sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1

Location

Chromosome 5: 136,975,298-137,499,348 reverse strand.

About this transcript

This transcript has 11 exons and is annotated with 20 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000129157 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SPOCK1-001	OTTHUMT00000251222.1	4846	439aa	OTTHUMP00000159433	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS4191	Q08629
SPOCK1-004	OTTHUMT00000373463.2	571	67aa	OTTHUMP00000223944	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SPOCK1-003	OTTHUMT00000373462.2	453	139aa	OTTHUMP00000223943	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SPOCK1-010	OTTHUMT00000488145.1	648	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SPOCK1-008	OTTHUMT00000373467.1	572	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SPOCK1-005	OTTHUMT00000373464.1	553	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SPOCK1-007	OTTHUMT00000373466.1	499	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SPOCK1-002	OTTHUMT00000372763.1	480	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SPOCK1-006	OTTHUMT00000373465.2	399	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SPOCK1-009	OTTHUMT00000373468.1	560	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 11 Transcript length: 4,846 bps Translation length: 439 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS4191

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 01/11/2005)

Alternative symbols

AC005213.1-001

Other assemblies

This transcript maps to 136,975,298-137,499,348 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000394945

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: SPOCK1-001 OTTHUMT00000251222.1

Summary

Transcript-based displays