Transcript: AFP-001 OTTHUMT00000252284.3

Description

alpha-fetoprotein

Location

Chromosome 4: 73,436,163-73,456,174 forward strand.

About this transcript

This transcript has 15 exons and is annotated with 40 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000130011 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
AFP-001	OTTHUMT00000252284.3	2484	609aa	OTTHUMP00000160480	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS3556	P02771
AFP-003	OTTHUMT00000365431.1	1914	622aa	OTTHUMP00000220440	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	J3KMX3
AFP-002	OTTHUMT00000365430.1	1880	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
AFP-008	OTTHUMT00000365436.1	476	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
AFP-004	OTTHUMT00000365432.1	317	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
AFP-005	OTTHUMT00000365433.1	197	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
AFP-006	OTTHUMT00000365434.1	728	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
AFP-007	OTTHUMT00000365435.1	693	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 15 Transcript length: 2,484 bps Translation length: 609 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS3556

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 21/11/2005)

Alternative symbols

AC108157.2-001

Other assemblies

This transcript maps to 73,436,163-73,456,174 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000395792

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: AFP-001 OTTHUMT00000252284.3

Summary

Transcript-based displays