Transcript: LIMK1-001 OTTHUMT00000252335.2

Description

LIM domain kinase 1

Location

Chromosome 7: 74,083,940-74,122,525 forward strand.

About this transcript

This transcript has 16 exons and is annotated with 32 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000023448 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
LIMK1-001	OTTHUMT00000252335.2	3219	647aa	OTTHUMP00000160532	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5563	P53667
LIMK1-005	OTTHUMT00000348347.2	2170	613aa	OTTHUMP00000211915	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS56491	-
LIMK1-002	OTTHUMT00000348344.1	3360	677aa	OTTHUMP00000211913	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9PC47
LIMK1-003	OTTHUMT00000348345.1	1883	305aa	OTTHUMP00000211914	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
LIMK1-007	OTTHUMT00000348349.1	587	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
LIMK1-006	OTTHUMT00000348348.1	569	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
LIMK1-004	OTTHUMT00000348346.1	3374	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
LIMK1-008	OTTHUMT00000348350.1	785	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 16 Transcript length: 3,219 bps Translation length: 647 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS5563

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 21/11/2005)

Alternative symbols

AC005057.2-001

Other assemblies

This transcript maps to 74,083,940-74,122,525 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000336180

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: LIMK1-001 OTTHUMT00000252335.2

Summary

Transcript-based displays