Description
PDZ and LIM domain 5
Location
Chromosome 4: 94,451,902-94,668,223 forward strand.
About this transcript
This transcript has 13 exons and is annotated with 26 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000130973 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| PDLIM5-001 | OTTHUMT00000253586.1 | 6083 | 596aa | OTTHUMP00000161598 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS3641 | Q96HC4 | |
| PDLIM5-010 | OTTHUMT00000362993.1 | 3356 | 625aa | OTTHUMP00000219310 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58916 | - | |
| PDLIM5-020 | OTTHUMT00000481781.1 | 2979 | 487aa | OTTHUMP00000278556 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS47102 | - | |
| PDLIM5-005 | OTTHUMT00000362988.3 | 2081 | 483aa | OTTHUMP00000219307 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58917 | - | |
| PDLIM5-008 | OTTHUMT00000362991.1 | 1794 | 234aa | OTTHUMP00000219309 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS47103 | - | |
| PDLIM5-004 | OTTHUMT00000362987.2 | 1189 | 136aa | OTTHUMP00000219306 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58915 | - | |
| PDLIM5-016 | OTTHUMT00000364271.2 | 794 | 196aa | OTTHUMP00000227958 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PDLIM5-013 | OTTHUMT00000364268.3 | 554 | 176aa | OTTHUMP00000278198 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PDLIM5-003 | OTTHUMT00000362986.1 | 538 | 38aa | OTTHUMP00000219305 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| PDLIM5-002 | OTTHUMT00000362985.1 | 372 | 47aa | OTTHUMP00000219304 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| PDLIM5-019 | OTTHUMT00000479818.1 | 1853 | 39aa | OTTHUMP00000278200 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| PDLIM5-012 | OTTHUMT00000362994.1 | 907 | 231aa | OTTHUMP00000219311 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H0Y8Y3 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PDLIM5-015 | OTTHUMT00000364270.2 | 554 | 85aa | OTTHUMP00000222057 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PDLIM5-009 | OTTHUMT00000362992.2 | 3098 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PDLIM5-017 | OTTHUMT00000364272.1 | 802 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PDLIM5-007 | OTTHUMT00000362990.1 | 547 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PDLIM5-006 | OTTHUMT00000362989.2 | 480 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PDLIM5-018 | OTTHUMT00000364273.1 | 463 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PDLIM5-014 | OTTHUMT00000364269.1 | 743 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
