Transcript: VAPA-002 OTTHUMT00000254489.2

Description

VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa

Location

Chromosome 18: 9,914,062-9,954,358 forward strand.

About this transcript

This transcript has 7 exons and is annotated with 12 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000131603 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
VAPA-001	OTTHUMT00000254490.1	6815	249aa	OTTHUMP00000162363	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS11848	Q9P0L0
VAPA-002	OTTHUMT00000254489.2	1227	294aa	OTTHUMP00000162362	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS11847	-
VAPA-005	OTTHUMT00000442550.2	567	29aa	OTTHUMP00000259756	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
VAPA-008	OTTHUMT00000442623.1	654	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
VAPA-009	OTTHUMT00000442553.2	532	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
VAPA-007	OTTHUMT00000442558.1	3760	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
VAPA-004	OTTHUMT00000442552.1	939	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
VAPA-003	OTTHUMT00000442549.1	917	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
VAPA-006	OTTHUMT00000442551.1	719	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 1,227 bps Translation length: 294 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS11847

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 14/12/2005)

Alternative symbols

AC006238.2-002

Other assemblies

This transcript maps to 9,914,062-9,954,358 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000340541

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: VAPA-002 OTTHUMT00000254489.2

Summary

Transcript-based displays