Transcript: VAPB-002 OTTHUMT00000267817.1

Description

VAMP (vesicle-associated membrane protein)-associated protein B and C

Location

About this transcript

This transcript has 3 exons and is annotated with 6 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
VAPB-001	OTTHUMT00000079875.2	7936	243aa	OTTHUMP00000031393	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS33498	O95292
VAPB-002	OTTHUMT00000267817.1	1834	99aa	OTTHUMP00000174286	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS56198	-
VAPB-006	OTTHUMT00000381405.1	937	71aa	OTTHUMP00000228173	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E5RK64
VAPB-004	OTTHUMT00000267819.1	3596	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
VAPB-003	OTTHUMT00000267818.1	2393	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
VAPB-005	OTTHUMT00000267820.1	3583	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 1,834 bps Translation length: 99 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS56198

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 05/05/2006)

Alternative symbols

RP5-1018E9.1-002

Other assemblies

This transcript maps to 58,389,313-58,445,552 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000395802

Curation Method

Manual annotation from Havana