Description
sec1 family domain containing 1
Location
Chromosome 14: 30,622,112-30,735,812 forward strand.
About this transcript
This transcript has 25 exons and is annotated with 13 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000029420 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SCFD1-006 | OTTHUMT00000276612.3 | 2359 | 642aa | OTTHUMP00000178786 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS9639 | Q8WVM8 | |
| SCFD1-004 | OTTHUMT00000073326.2 | 2058 | 575aa | OTTHUMP00000244059 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS45092 | - | |
| SCFD1-010 | OTTHUMT00000409684.1 | 2021 | 550aa | OTTHUMP00000244066 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58308 | - | |
| SCFD1-014 | OTTHUMT00000409682.1 | 743 | 198aa | OTTHUMP00000244064 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | G3V2M8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SCFD1-001 | OTTHUMT00000073324.2 | 696 | 144aa | OTTHUMP00000244068 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YJY1 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SCFD1-015 | OTTHUMT00000409683.2 | 490 | 84aa | OTTHUMP00000244065 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | G3V5E2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SCFD1-002 | OTTHUMT00000073325.2 | 2308 | 55aa | OTTHUMP00000244061 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | G3V551 | |
| SCFD1-009 | OTTHUMT00000409681.1 | 2016 | 163aa | OTTHUMP00000244063 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3KNG4 | |
| SCFD1-008 | OTTHUMT00000409678.1 | 1943 | 48aa | OTTHUMP00000244058 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SCFD1-007 | OTTHUMT00000409679.1 | 1829 | 75aa | OTTHUMP00000244060 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | G3V4I1 | |
| SCFD1-005 | OTTHUMT00000073322.3 | 1553 | 121aa | OTTHUMP00000028197 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | G3V5F3 | |
| SCFD1-022 | OTTHUMT00000409693.1 | 688 | 35aa | OTTHUMP00000244069 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SCFD1-026 | OTTHUMT00000409687.1 | 583 | 102aa | OTTHUMP00000244067 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H0YJS6 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SCFD1-013 | OTTHUMT00000409680.1 | 556 | 92aa | OTTHUMP00000244062 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | G3V363 | |
| SCFD1-019 | OTTHUMT00000409692.1 | 819 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SCFD1-017 | OTTHUMT00000409689.1 | 608 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SCFD1-012 | OTTHUMT00000409694.1 | 974 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCFD1-020 | OTTHUMT00000409688.1 | 864 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCFD1-018 | OTTHUMT00000409690.1 | 795 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCFD1-025 | OTTHUMT00000409697.1 | 574 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCFD1-023 | OTTHUMT00000409696.1 | 541 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCFD1-016 | OTTHUMT00000409686.1 | 512 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCFD1-021 | OTTHUMT00000409691.1 | 497 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCFD1-024 | OTTHUMT00000409695.1 | 428 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
