Description
interleukin 16 (lymphocyte chemoattractant factor)
Location
Chromosome 15: 81,225,400-81,308,798 forward strand.
About this transcript
This transcript has 18 exons and is annotated with 35 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000144186 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| IL16-001 | OTTHUMT00000291391.5 | 9616 | 1331aa | OTTHUMP00000185571 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS53966 | - | |
| IL16-003 | OTTHUMT00000303952.2 | 3999 | 1332aa | OTTHUMP00000190850 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS42069 | Q14005 | |
| IL16-002 | OTTHUMT00000303951.3 | 2397 | 631aa | OTTHUMP00000190849 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS10317 | Q14005 | |
| IL16-006 | OTTHUMT00000417296.3 | 2158 | 594aa | OTTHUMP00000247844 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| IL16-005 | OTTHUMT00000417298.2 | 2020 | 611aa | OTTHUMP00000247846 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YLH9 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| IL16-008 | OTTHUMT00000417531.2 | 8581 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| IL16-012 | OTTHUMT00000417534.1 | 2931 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| IL16-011 | OTTHUMT00000417529.1 | 883 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| IL16-009 | OTTHUMT00000417532.2 | 5120 | 484aa | OTTHUMP00000256125 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| IL16-013 | OTTHUMT00000417533.2 | 3775 | 201aa | OTTHUMP00000256126 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| IL16-007 | OTTHUMT00000417528.2 | 2977 | 454aa | OTTHUMP00000247949 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| IL16-004 | OTTHUMT00000417297.3 | 1922 | 44aa | OTTHUMP00000247845 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| IL16-016 | OTTHUMT00000417535.1 | 626 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| IL16-014 | OTTHUMT00000417536.1 | 561 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| IL16-017 | OTTHUMT00000417527.1 | 545 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| IL16-015 | OTTHUMT00000417537.1 | 525 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
