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Description

spectrin repeat containing, nuclear envelope 1

About this transcript

This transcript has 146 exons and is annotated with 244 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
SYNE1-001OTTHUMT00000334755.2277488797aaOTTHUMP00000205471
 
Protein coding
CCDS5236Q8NF91
SYNE1-002OTTHUMT00000042732.5274368749aaOTTHUMP00000017440
 
Protein coding
CCDS5235A0A0C4DG40
SYNE1-009OTTHUMT00000042745.271651433aaOTTHUMP00000017445
 
Protein coding
-F5GXQ8
SYNE1-006OTTHUMT00000042734.358371654aaOTTHUMP00000237430
 
Protein coding
-H0Y325 CDS 5' incomplete
SYNE1-010OTTHUMT00000042747.251891725aaOTTHUMP00000017447
 
Protein coding
--
SYNE1-033OTTHUMT00000397276.150221355aaOTTHUMP00000237470
 
Protein coding
-H0Y326 CDS 5' incomplete
SYNE1-029OTTHUMT00000397281.148601443aaOTTHUMP00000237472
 
Protein coding
--
SYNE1-005OTTHUMT00000042733.23768952aaOTTHUMP00000017441
 
Protein coding
-Q5JV20
SYNE1-027OTTHUMT00000397251.13154975aaOTTHUMP00000237449
 
Protein coding
-F8WAI0
SYNE1-030OTTHUMT00000397283.22850615aaOTTHUMP00000237473
 
Protein coding
-F5GYQ7 CDS 3' incomplete
SYNE1-021OTTHUMT00000334764.22610754aaOTTHUMP00000237452
 
Protein coding
-F5H4Q0
SYNE1-022OTTHUMT00000042746.21907612aaOTTHUMP00000237450
 
Protein coding
-F5H422
SYNE1-012OTTHUMT00000042738.31546510aaOTTHUMP00000205473
 
Protein coding
--CDS 5' incomplete
SYNE1-036OTTHUMT00000397279.2776242aaOTTHUMP00000237471
 
Protein coding
-F5H6R8 CDS 3' incomplete
SYNE1-037OTTHUMT00000397295.2647195aaOTTHUMP00000237474
 
Protein coding
-F5GZ83 CDS 3' incomplete
SYNE1-013OTTHUMT00000334756.2630207aaOTTHUMP00000237437
 
Protein coding
--CDS 5' incomplete
SYNE1-032OTTHUMT00000397277.11834No protein-
 
Artifact
--
SYNE1-023OTTHUMT00000334765.2179862aaOTTHUMP00000237451
 
Nonsense mediated decay
--CDS 5' incomplete
SYNE1-004OTTHUMT00000042730.33798No protein-
 
Processed transcript
--
SYNE1-028OTTHUMT00000397250.23664No protein-
 
Processed transcript
--
SYNE1-034OTTHUMT00000397278.13003No protein-
 
Processed transcript
--
SYNE1-031OTTHUMT00000397282.11388No protein-
 
Processed transcript
--
SYNE1-020OTTHUMT00000334763.2585No protein-
 
Processed transcript
--
SYNE1-025OTTHUMT00000334767.1582No protein-
 
Processed transcript
--
SYNE1-024OTTHUMT00000334766.1578No protein-
 
Processed transcript
--
SYNE1-011OTTHUMT00000042729.310742No protein-
 
Retained intron
--
SYNE1-015OTTHUMT00000334758.410634No protein-
 
Retained intron
--
SYNE1-014OTTHUMT00000334757.210075No protein-
 
Retained intron
--
SYNE1-017OTTHUMT00000334760.17780No protein-
 
Retained intron
--
SYNE1-018OTTHUMT00000334761.17229No protein-
 
Retained intron
--
SYNE1-003OTTHUMT00000042731.35707No protein-
 
Retained intron
--
SYNE1-016OTTHUMT00000334759.11891No protein-
 
Retained intron
--
SYNE1-019OTTHUMT00000334762.3688No protein-
 
Retained intron
--
SYNE1-026OTTHUMT00000334768.2581No protein-
 
Retained intron
--
SYNE1-035OTTHUMT00000397280.1561No protein-
 
Retained intron
--
SYNE1-038OTTHUMT00000397294.1526No protein-
 
Retained intron
--
SYNE1-007OTTHUMT00000042735.2525No protein-
 
Retained intron
--
SYNE1-008OTTHUMT00000042736.2414No protein-
 
Retained intron
--
Statistics

Exons: 146 Transcript length: 27,748 bps Translation length: 8,797 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS5236

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 27/08/2008)

Alternative symbols

RP1-130E4.2-001

Other assemblies

This transcript maps to 152,121,684-152,637,399 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays