Description
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
Location
Chromosome 7: 100,107,079-100,119,346 reverse strand.
About this transcript
This transcript has 15 exons and is annotated with 16 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000154771 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| TAF6-001 | OTTHUMT00000337024.2 | 2727 | 677aa | OTTHUMP00000206641 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS5686 | P49848 | |
| TAF6-004 | OTTHUMT00000337139.2 | 2464 | 677aa | OTTHUMP00000206716 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS5686 | P49848 | |
| TAF6-002 | OTTHUMT00000337137.2 | 2318 | 714aa | OTTHUMP00000206714 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS55135 | - | |
| TAF6-007 | OTTHUMT00000337212.2 | 2297 | 677aa | OTTHUMP00000206752 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS5686 | P49848 | |
| TAF6-016 | OTTHUMT00000354214.1 | 2551 | 734aa | OTTHUMP00000214590 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3KR72 | |
| TAF6-017 | OTTHUMT00000354215.2 | 934 | 255aa | OTTHUMP00000214591 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JTY6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TAF6-010 | OTTHUMT00000337215.3 | 871 | 232aa | OTTHUMP00000206755 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JFL8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TAF6-019 | OTTHUMT00000379694.1 | 751 | 141aa | OTTHUMP00000227191 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E5RHA1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TAF6-009 | OTTHUMT00000337214.2 | 703 | 114aa | OTTHUMP00000206754 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9J7C4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TAF6-008 | OTTHUMT00000337213.2 | 612 | 134aa | OTTHUMP00000206753 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JIS2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TAF6-014 | OTTHUMT00000337221.2 | 563 | 156aa | OTTHUMP00000206758 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9J088 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TAF6-020 | OTTHUMT00000379695.2 | 546 | 113aa | OTTHUMP00000227192 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E5RKA5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TAF6-013 | OTTHUMT00000337218.2 | 537 | 76aa | OTTHUMP00000206757 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JHQ8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TAF6-012 | OTTHUMT00000337217.5 | 471 | 9aa | OTTHUMP00000225438 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TAF6-018 | OTTHUMT00000376485.2 | 321 | 13aa | OTTHUMP00000225437 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TAF6-005 | OTTHUMT00000337140.3 | 2299 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| TAF6-003 | OTTHUMT00000337138.1 | 2685 | 114aa | OTTHUMP00000206715 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F8WEJ7 | |
| TAF6-011 | OTTHUMT00000337216.1 | 457 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TAF6-015 | OTTHUMT00000338165.2 | 1195 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TAF6-006 | OTTHUMT00000338166.1 | 384 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
