Transcript: TOP2A-001 OTTHUMT00000338035.1

Description

topoisomerase (DNA) II alpha 170kDa

Location

About this transcript

This transcript has 35 exons and is annotated with 51 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
TOP2A-001	OTTHUMT00000338035.1	5758	1531aa	OTTHUMP00000207108	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS45672	P11388
TOP2A-003	OTTHUMT00000447455.1	579	147aa	OTTHUMP00000262031	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	J3KTB7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
TOP2A-006	OTTHUMT00000447451.1	420	27aa	OTTHUMP00000262030	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
TOP2A-002	OTTHUMT00000447454.1	1561	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
TOP2A-005	OTTHUMT00000447452.1	882	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
TOP2A-004	OTTHUMT00000447453.1	554	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 35 Transcript length: 5,758 bps Translation length: 1,531 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS45672

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 14/10/2008)

Alternative symbols

AC080112.5-001

Other assemblies

This transcript maps to 40,388,516-40,417,950 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000423485

Curation Method

Manual annotation from Havana