Transcript: TRPV6-001 OTTHUMT00000347662.3

Description

transient receptor potential cation channel, subfamily V, member 6

Location

Chromosome 7: 142,871,203-142,885,762 reverse strand.

About this transcript

This transcript has 15 exons and is annotated with 40 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000157158 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
TRPV6-001	OTTHUMT00000347662.3	2928	765aa	OTTHUMP00000211574	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5874	Q9H1D0
TRPV6-006	OTTHUMT00000347667.4	532	122aa	OTTHUMP00000211576	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9J9W0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
TRPV6-007	OTTHUMT00000347668.2	247	56aa	OTTHUMP00000211577	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9JHY1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
TRPV6-002	OTTHUMT00000347663.2	2314	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
TRPV6-005	OTTHUMT00000347666.2	10433	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
TRPV6-004	OTTHUMT00000347665.2	2406	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
TRPV6-003	OTTHUMT00000347664.3	1806	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
TRPV6-008	OTTHUMT00000347669.2	673	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
TRPV6-009	OTTHUMT00000347670.1	540	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 15 Transcript length: 2,928 bps Translation length: 765 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS5874

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 09/02/2015 (Created on 17/02/2009)

Alternative symbols

RP11-114L10.1-001

Remarks

non-ATG start

Other assemblies

This transcript maps to 142,871,203-142,885,762 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000359396

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: TRPV6-001 OTTHUMT00000347662.3

Summary

Transcript-based displays