Description
GTPase activating protein and VPS9 domains 1
Location
Chromosome 9: 125,261,911-125,364,119 forward strand.
About this transcript
This transcript has 28 exons and is annotated with 21 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000020678 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| GAPVD1-002 | OTTHUMT00000054071.4 | 8923 | 1433aa | OTTHUMP00000022130 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS83414 | A0A024R875 | |
| GAPVD1-015 | OTTHUMT00000355645.1 | 6003 | 1460aa | OTTHUMP00000215490 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS65131 | A0A024R862 | |
| GAPVD1-014 | OTTHUMT00000355644.1 | 5309 | 1478aa | OTTHUMP00000215489 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS65132 | Q14C86 | |
| GAPVD1-012 | OTTHUMT00000355642.1 | 5207 | 1487aa | OTTHUMP00000215487 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS35138 | A0A024R8A2 | |
| GAPVD1-016 | OTTHUMT00000355646.1 | 4747 | 1412aa | OTTHUMP00000215491 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS83413 | F8W9S7 | |
| GAPVD1-003 | OTTHUMT00000317193.2 | 4320 | 1439aa | OTTHUMP00000196806 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS65130 | - | |
| GAPVD1-005 | OTTHUMT00000054074.2 | 3190 | 497aa | OTTHUMP00000022133 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B0QZ65 | |
| GAPVD1-001 | OTTHUMT00000317192.3 | 3163 | 988aa | OTTHUMP00000196805 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9IZ08 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| GAPVD1-009 | OTTHUMT00000054078.3 | 2512 | 837aa | OTTHUMP00000022134 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0Y7I9 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| GAPVD1-011 | OTTHUMT00000317195.2 | 2490 | 830aa | OTTHUMP00000196807 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0Y4E7 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| GAPVD1-017 | OTTHUMT00000355647.2 | 582 | 117aa | OTTHUMP00000215492 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| GAPVD1-007 | OTTHUMT00000054076.1 | 2376 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| GAPVD1-013 | OTTHUMT00000355643.1 | 3720 | 756aa | OTTHUMP00000215488 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | B4DGD8 | |
| GAPVD1-018 | OTTHUMT00000355648.1 | 466 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| GAPVD1-008 | OTTHUMT00000054077.1 | 385 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| GAPVD1-004 | OTTHUMT00000054079.2 | 274 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| GAPVD1-006 | OTTHUMT00000054075.1 | 2545 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| GAPVD1-019 | OTTHUMT00000355649.1 | 787 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| GAPVD1-010 | OTTHUMT00000317194.1 | 575 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
