Transcript: LIN54-003 OTTHUMT00000363083.1

Description

lin-54 homolog (C. elegans)

Location

Chromosome 4: 82,927,777-83,012,926 reverse strand.

About this transcript

This transcript has 13 exons and is annotated with 10 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000130287 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
LIN54-001	OTTHUMT00000252626.2	6127	749aa	OTTHUMP00000160794	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS3599	Q6MZP7
LIN54-006	OTTHUMT00000363086.1	4254	528aa	OTTHUMP00000219382	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS47089	-
LIN54-004	OTTHUMT00000363084.1	4083	528aa	OTTHUMP00000219380	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS47089	-
LIN54-008	OTTHUMT00000363088.1	2757	660aa	OTTHUMP00000219384	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS75157	-
LIN54-003	OTTHUMT00000363083.1	2742	749aa	OTTHUMP00000219379	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS3599	Q6MZP7
LIN54-002	OTTHUMT00000363082.1	2257	528aa	OTTHUMP00000219378	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS47089	-
LIN54-005	OTTHUMT00000363085.1	4507	62aa	OTTHUMP00000219381	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
LIN54-007	OTTHUMT00000363087.1	2684	243aa	OTTHUMP00000219383	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
LIN54-009	OTTHUMT00000363089.1	810	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
LIN54-010	OTTHUMT00000363090.1	729	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 13 Transcript length: 2,742 bps Translation length: 749 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS3599

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 11/09/2009)

Alternative symbols

AC021105.2-003

Remarks

alternative 5' UTR

Other assemblies

This transcript maps to 82,927,777-83,012,926 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000505397

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: LIN54-003 OTTHUMT00000363083.1

Summary

Transcript-based displays