Transcript: PCDH18-001 OTTHUMT00000364614.1

Description

protocadherin 18

Location

Chromosome 4: 137,518,918-137,532,475 reverse strand.

About this transcript

This transcript has 4 exons and is annotated with 47 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000161348 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
PCDH18-001	OTTHUMT00000364614.1	5906	1135aa	OTTHUMP00000220079	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS34064	Q9HCL0
PCDH18-002	OTTHUMT00000364615.2	5102	1134aa	OTTHUMP00000220080	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS75193	-
PCDH18-003	OTTHUMT00000364616.1	4625	914aa	OTTHUMP00000220081	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D6RIG4
PCDH18-005	OTTHUMT00000364618.1	1483	346aa	OTTHUMP00000220082	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	B4DQ29
PCDH18-006	OTTHUMT00000364619.2	1331	315aa	OTTHUMP00000220083	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	B4DLR6
PCDH18-007	OTTHUMT00000478825.1	819	96aa	OTTHUMP00000277740	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A087WTW3
PCDH18-004	OTTHUMT00000364617.1	5103	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
PCDH18-008	OTTHUMT00000478826.1	553	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
PCDH18-009	OTTHUMT00000478827.1	895	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 5,906 bps Translation length: 1,135 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS34064

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 01/04/2014 (Created on 24/09/2009)

Alternative symbols

RP13-884E18.1-001

Remarks

NP_061908.1

Other assemblies

This transcript maps to 137,518,918-137,532,475 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000344876

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: PCDH18-001 OTTHUMT00000364614.1

Summary

Transcript-based displays