Description
Wolf-Hirschhorn syndrome candidate 1
Location
Chromosome 4: 1,892,845-1,982,207 forward strand.
About this transcript
This transcript has 24 exons and is annotated with 50 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000121147 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| WHSC1-004 | OTTHUMT00000250868.2 | 8568 | 647aa | OTTHUMP00000159146 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS3356 | - | |
| WHSC1-008 | OTTHUMT00000366269.2 | 7827 | 1365aa | OTTHUMP00000220796 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS33940 | O96028 | |
| WHSC1-006 | OTTHUMT00000366219.1 | 5109 | 629aa | OTTHUMP00000220792 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS46999 | - | |
| WHSC1-011 | OTTHUMT00000366357.2 | 4251 | 1365aa | OTTHUMP00000220830 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS33940 | O96028 | |
| WHSC1-010 | OTTHUMT00000366278.1 | 3964 | 629aa | OTTHUMP00000220798 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS46999 | - | |
| WHSC1-005 | OTTHUMT00000250869.2 | 2666 | 713aa | OTTHUMP00000159147 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| WHSC1-015 | OTTHUMT00000366407.2 | 1212 | 392aa | OTTHUMP00000220855 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6R9V2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| WHSC1-024 | OTTHUMT00000366416.5 | 851 | 284aa | OTTHUMP00000220857 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0Y9U6 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| WHSC1-014 | OTTHUMT00000366406.6 | 816 | 199aa | OTTHUMP00000220854 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RIS1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| WHSC1-013 | OTTHUMT00000366405.3 | 528 | 37aa | OTTHUMP00000220853 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| WHSC1-001 | OTTHUMT00000241629.5 | 8140 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| WHSC1-007 | OTTHUMT00000366268.1 | 8050 | 647aa | OTTHUMP00000220795 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | CCDS3356 | - | |
| WHSC1-002 | OTTHUMT00000241630.4 | 7980 | 647aa | OTTHUMP00000196943 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | CCDS3356 | - | |
| WHSC1-012 | OTTHUMT00000366358.2 | 1095 | 273aa | OTTHUMP00000220858 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| WHSC1-016 | OTTHUMT00000366408.1 | 690 | 163aa | OTTHUMP00000220856 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| WHSC1-003 | OTTHUMT00000241631.4 | 3602 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| WHSC1-022 | OTTHUMT00000366414.1 | 990 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| WHSC1-021 | OTTHUMT00000366413.1 | 812 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| WHSC1-017 | OTTHUMT00000366409.1 | 648 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| WHSC1-023 | OTTHUMT00000366415.1 | 421 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| WHSC1-009 | OTTHUMT00000366270.2 | 2092 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| WHSC1-019 | OTTHUMT00000366411.1 | 592 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| WHSC1-018 | OTTHUMT00000366410.1 | 571 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| WHSC1-020 | OTTHUMT00000366412.1 | 563 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
