Transcript: TTC39B-005 OTTHUMT00000371769.1

Description

tetratricopeptide repeat domain 39B

Location

Chromosome 9: 15,171,946-15,250,116 reverse strand.

About this transcript

This transcript has 18 exons and is annotated with 14 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000019581 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
TTC39B-001	OTTHUMT00000051758.3	10483	682aa	OTTHUMP00000021065	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6477
TTC39B-007	OTTHUMT00000371771.2	2243	517aa	OTTHUMP00000223200	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS55294
TTC39B-005	OTTHUMT00000371769.1	1950	517aa	OTTHUMP00000223199	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS55294
TTC39B-004	OTTHUMT00000371768.1	900	69aa	OTTHUMP00000223198	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
TTC39B-002	OTTHUMT00000051759.4	2387	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-
TTC39B-010	OTTHUMT00000447019.1	567	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-
TTC39B-006	OTTHUMT00000371770.1	1881	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-
TTC39B-003	OTTHUMT00000051760.2	1326	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Statistics

Exons: 18 Transcript length: 1,950 bps Translation length: 517 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS55294

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 04/12/2009)

Alternative symbols

RP11-224J22.1-005

Other assemblies

This transcript maps to 15,171,946-15,250,116 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000507993

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: TTC39B-005 OTTHUMT00000371769.1

Summary

Transcript-based displays