Transcript: SLC39A4-001 OTTHUMT00000382688.2

Description

solute carrier family 39 (zinc transporter), member 4

Location

Chromosome 8: 144,412,414-144,416,895 reverse strand.

About this transcript

This transcript has 12 exons and is annotated with 22 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000165208 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SLC39A4-002	OTTHUMT00000382687.3	2297	622aa	OTTHUMP00000228914	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS43782	A6NDY5
SLC39A4-001	OTTHUMT00000382688.2	2174	647aa	OTTHUMP00000228915	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6424	A0A0S2Z5G8
SLC39A4-010	OTTHUMT00000382691.3	583	184aa	OTTHUMP00000228916	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SLC39A4-003	OTTHUMT00000382686.2	1814	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
SLC39A4-006	OTTHUMT00000382689.1	795	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SLC39A4-009	OTTHUMT00000382682.1	684	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SLC39A4-004	OTTHUMT00000382685.1	668	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SLC39A4-007	OTTHUMT00000382684.1	498	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SLC39A4-008	OTTHUMT00000382690.1	361	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SLC39A4-005	OTTHUMT00000382683.2	2778	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 12 Transcript length: 2,174 bps Translation length: 647 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS6424

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 26/04/2010)

Alternative symbols

GS1-393G12.9-001

Other assemblies

This transcript maps to 144,412,414-144,416,895 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000301305

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: SLC39A4-001 OTTHUMT00000382688.2

Summary

Transcript-based displays