Transcript: RNF170-007 OTTHUMT00000383170.2

Description

ring finger protein 170

Location

About this transcript

This transcript has 6 exons and is annotated with 9 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
RNF170-001	OTTHUMT00000383166.1	3880	258aa	OTTHUMP00000229195	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6138	Q96K19
RNF170-005	OTTHUMT00000383165.1	1866	200aa	OTTHUMP00000229194	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS55230	-
RNF170-003	OTTHUMT00000383168.1	1338	174aa	OTTHUMP00000229197	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS55229	-
RNF170-007	OTTHUMT00000383170.2	580	115aa	OTTHUMP00000229198	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9PP55	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
RNF170-006	OTTHUMT00000383171.1	195	45aa	OTTHUMP00000229199	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9PNG8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
RNF170-004	OTTHUMT00000383167.1	2023	116aa	OTTHUMP00000229196	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
RNF170-002	OTTHUMT00000383169.1	1169	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 580 bps Translation length: 115 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 29/04/2010)

Alternative symbols

RP11-89A4.4-007

Remarks

alternative 5' UTR

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 42,865,466-42,896,598 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000531440

Curation Method

Manual annotation from Havana