Description
ATG13 autophagy related 13 homolog (S. cerevisiae)
Location
Chromosome 11: 46,617,563-46,672,660 forward strand.
About this transcript
This transcript has 15 exons and is annotated with 5 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000166538 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| ATG13-006 | OTTHUMT00000390300.2 | 4348 | 517aa | OTTHUMP00000233325 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44582 | O75143 | |
| ATG13-004 | OTTHUMT00000390297.1 | 4199 | 517aa | OTTHUMP00000233323 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44582 | O75143 | |
| ATG13-001 | OTTHUMT00000390298.1 | 4014 | 480aa | OTTHUMP00000233324 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7921 | - | |
| ATG13-003 | OTTHUMT00000390295.1 | 2566 | 480aa | OTTHUMP00000233321 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7921 | - | |
| ATG13-008 | OTTHUMT00000390301.1 | 2351 | 550aa | OTTHUMP00000233326 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS55760 | - | |
| ATG13-005 | OTTHUMT00000390296.1 | 2030 | 401aa | OTTHUMP00000233322 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS55761 | - | |
| ATG13-024 | OTTHUMT00000390420.2 | 1021 | 119aa | OTTHUMP00000233430 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PPR2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| ATG13-032 | OTTHUMT00000447053.1 | 937 | 198aa | OTTHUMP00000261806 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J9JIF6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| ATG13-026 | OTTHUMT00000447047.2 | 741 | 50aa | OTTHUMP00000261800 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| ATG13-027 | OTTHUMT00000447045.2 | 624 | 32aa | OTTHUMP00000261799 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| ATG13-030 | OTTHUMT00000447048.2 | 619 | 13aa | OTTHUMP00000261801 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| ATG13-031 | OTTHUMT00000447051.2 | 613 | 56aa | OTTHUMP00000261804 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| ATG13-028 | OTTHUMT00000447052.2 | 600 | 38aa | OTTHUMP00000261805 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| ATG13-034 | OTTHUMT00000447050.2 | 587 | 33aa | OTTHUMP00000261803 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| ATG13-017 | OTTHUMT00000390426.1 | 583 | 47aa | OTTHUMP00000233431 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| ATG13-018 | OTTHUMT00000390427.2 | 581 | 193aa | OTTHUMP00000233432 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| ATG13-029 | OTTHUMT00000447049.2 | 544 | 27aa | OTTHUMP00000261802 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| ATG13-002 | OTTHUMT00000390294.1 | 3427 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| ATG13-009 | OTTHUMT00000390305.1 | 2324 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| ATG13-019 | OTTHUMT00000390428.1 | 667 | 78aa | OTTHUMP00000233433 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| ATG13-020 | OTTHUMT00000390429.1 | 297 | 42aa | OTTHUMP00000233434 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| ATG13-021 | OTTHUMT00000390430.1 | 637 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ATG13-022 | OTTHUMT00000390419.1 | 578 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ATG13-011 | OTTHUMT00000390304.1 | 562 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ATG13-023 | OTTHUMT00000390421.1 | 552 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ATG13-025 | OTTHUMT00000447046.1 | 498 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ATG13-007 | OTTHUMT00000390299.1 | 1655 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ATG13-014 | OTTHUMT00000390423.1 | 662 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ATG13-013 | OTTHUMT00000390422.1 | 587 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ATG13-012 | OTTHUMT00000390303.1 | 579 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ATG13-016 | OTTHUMT00000390425.1 | 578 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ATG13-015 | OTTHUMT00000390424.1 | 574 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
