Transcript: PRPH-001 OTTHUMT00000393381.2

Description

peripherin

Location

About this transcript

This transcript has 9 exons and is annotated with 21 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PRPH-001	OTTHUMT00000393381.2	3245	470aa	OTTHUMP00000235301	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS8783	P41219
PRPH-004	OTTHUMT00000393383.2	840	200aa	OTTHUMP00000235303	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7C5W5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
PRPH-002	OTTHUMT00000393384.4	704	207aa	OTTHUMP00000235304	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F8W835	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
PRPH-008	OTTHUMT00000404378.1	564	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
PRPH-006	OTTHUMT00000393385.1	946	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
PRPH-003	OTTHUMT00000393386.1	865	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
PRPH-007	OTTHUMT00000398094.1	630	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 3,245 bps Translation length: 470 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS8783

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 11/08/2010)

Alternative symbols

RP11-161H23.1-001

Other assemblies

This transcript maps to 49,293,702-49,298,686 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000257860

Curation Method

Manual annotation from Havana