Transcript: TTC9C-004 OTTHUMT00000395336.2

Description

tetratricopeptide repeat domain 9C

Location

About this transcript

This transcript has 3 exons and is annotated with 11 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
TTC9C-001	OTTHUMT00000395338.1	1080	171aa	OTTHUMP00000236333	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS8033	Q8N5M4
TTC9C-002	OTTHUMT00000395339.1	858	171aa	OTTHUMP00000236334	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS8033	Q8N5M4
TTC9C-004	OTTHUMT00000395336.2	606	140aa	OTTHUMP00000236331	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
TTC9C-003	OTTHUMT00000395337.1	1833	82aa	OTTHUMP00000236332	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
TTC9C-005	OTTHUMT00000395340.1	627	69aa	OTTHUMP00000236335	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
TTC9C-006	OTTHUMT00000464641.1	346	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 606 bps Translation length: 140 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 01/09/2010)

Alternative symbols

RP11-727F15.1-004

Remarks

alternative 5' UTR

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 62,728,069-62,735,564 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000530625

Curation Method

Manual annotation from Havana