Transcript: SLCO1C1-002 OTTHUMT00000401764.1

Description

solute carrier organic anion transporter family, member 1C1

Location

Chromosome 12: 20,695,462-20,752,817 forward strand.

About this transcript

This transcript has 15 exons and is annotated with 28 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000168966 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
SLCO1C1-001	OTTHUMT00000401765.1	3365	712aa	OTTHUMP00000239828	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS8683	Q9NYB5
SLCO1C1-004	OTTHUMT00000401768.1	2868	612aa	OTTHUMP00000239829	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS53759	-
SLCO1C1-010	OTTHUMT00000474423.1	2557	730aa	OTTHUMP00000275001	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS53757	-
SLCO1C1-002	OTTHUMT00000401764.1	2529	663aa	OTTHUMP00000239827	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS53758	-
SLCO1C1-005	OTTHUMT00000401769.1	2702	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
SLCO1C1-003	OTTHUMT00000401763.1	2414	46aa	OTTHUMP00000239826	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
SLCO1C1-007	OTTHUMT00000401767.1	780	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SLCO1C1-006	OTTHUMT00000401762.1	557	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SLCO1C1-008	OTTHUMT00000401770.1	171	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SLCO1C1-009	OTTHUMT00000401766.1	812	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 15 Transcript length: 2,529 bps Translation length: 663 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS53758

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 29/11/2010)

Alternative symbols

RP11-125G9.1-002

Other assemblies

This transcript maps to 20,695,462-20,752,817 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000540354

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: SLCO1C1-002 OTTHUMT00000401764.1

Summary

Transcript-based displays