Transcript: ASIC1-009 OTTHUMT00000407190.1

Description

acid-sensing (proton-gated) ion channel 1

Location

Chromosome 12: 50,073,575-50,083,277 forward strand.

About this transcript

This transcript has 10 exons and is annotated with 23 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000169812 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ASIC1-001	OTTHUMT00000406003.2	4072	574aa	OTTHUMP00000242165	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS8796	-
ASIC1-002	OTTHUMT00000406004.2	3778	528aa	OTTHUMP00000242166	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS44876	P78348
ASIC1-009	OTTHUMT00000407190.1	3327	562aa	OTTHUMP00000242774	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS58228	-
ASIC1-007	OTTHUMT00000407189.1	1481	396aa	OTTHUMP00000242773	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7C1W9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ASIC1-008	OTTHUMT00000407191.2	614	127aa	OTTHUMP00000242775	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0YHD6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ASIC1-003	OTTHUMT00000406005.1	3819	263aa	OTTHUMP00000242167	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F8VSK4
ASIC1-004	OTTHUMT00000406006.1	1223	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ASIC1-006	OTTHUMT00000406008.1	560	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ASIC1-005	OTTHUMT00000406007.1	350	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 10 Transcript length: 3,327 bps Translation length: 562 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS58228

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 04/02/2011)

Alternative symbols

RP11-469H8.4-009

Annotation Attributes

not organism-supported [Definitions]

Other assemblies

This transcript maps to 50,073,575-50,083,277 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000552438

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: ASIC1-009 OTTHUMT00000407190.1

Summary

Transcript-based displays