Description
BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)
Location
Chromosome 14: 105,209,286-105,300,725 reverse strand.
About this transcript
This transcript has 17 exons and is annotated with 27 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000029884 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| BRF1-001 | OTTHUMT00000074550.3 | 3579 | 473aa | OTTHUMP00000163910 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS42001 | A0A024R6P8 | |
| BRF1-002 | OTTHUMT00000074548.5 | 3358 | 677aa | OTTHUMP00000028454 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS10001 | Q92994 | |
| BRF1-010 | OTTHUMT00000408726.1 | 3314 | 650aa | OTTHUMP00000243596 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS55952 | - | |
| BRF1-011 | OTTHUMT00000408730.1 | 2858 | 439aa | OTTHUMP00000243598 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS55949 | - | |
| BRF1-008 | OTTHUMT00000408736.2 | 2368 | 584aa | OTTHUMP00000243601 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS55951 | - | |
| BRF1-009 | OTTHUMT00000408735.1 | 2292 | 562aa | OTTHUMP00000243600 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS55950 | - | |
| BRF1-012 | OTTHUMT00000408744.3 | 1452 | 208aa | OTTHUMP00000243607 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS55953 | V9HVY2 | |
| BRF1-018 | OTTHUMT00000409155.2 | 1962 | 234aa | OTTHUMP00000243798 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8VS45 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| BRF1-022 | OTTHUMT00000409156.2 | 1362 | 14aa | OTTHUMP00000243799 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| BRF1-019 | OTTHUMT00000408742.3 | 1040 | 45aa | OTTHUMP00000243605 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8VWY1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| BRF1-007 | OTTHUMT00000408734.1 | 824 | 161aa | OTTHUMP00000243599 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q3SYD7 | |
| BRF1-017 | OTTHUMT00000408739.2 | 778 | 155aa | OTTHUMP00000243602 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8VWT8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| BRF1-015 | OTTHUMT00000408743.2 | 600 | 63aa | OTTHUMP00000243606 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8VXJ4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| BRF1-016 | OTTHUMT00000408741.2 | 554 | 185aa | OTTHUMP00000243604 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YIV6 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| BRF1-003 | OTTHUMT00000408729.1 | 2069 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| BRF1-004 | OTTHUMT00000408731.1 | 884 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| BRF1-006 | OTTHUMT00000408733.1 | 813 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| BRF1-005 | OTTHUMT00000408732.1 | 467 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| BRF1-021 | OTTHUMT00000408737.1 | 521 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| BRF1-014 | OTTHUMT00000408727.1 | 3809 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| BRF1-013 | OTTHUMT00000408728.2 | 2876 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| BRF1-023 | OTTHUMT00000409154.3 | 2405 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| BRF1-026 | OTTHUMT00000409153.1 | 1999 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| BRF1-020 | OTTHUMT00000408738.1 | 771 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
